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GrainGenes Probe Report: TraesCS7B01G050100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS7B01G050100
Locus	TraesCS7B01G050100.3
URL	Pfam PF00385 [ Show all 22 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|Q5SML0|Q5SML0_ORYSJ Human Readable Description: Chromatin-remodeling factor CHD3 Pfam IDs Description: PF00385: Chromo (CHRromatin Organisation MOdifier) domain; PF00176: SNF2 family N-terminal domain; PF00271: Helicase conserved C-terminal domain; PF06465: Domain of Unknown Function (DUF1087); PF06461: Domain of Unknown Function (DUF1086) InterPro IDs Description: IPR000330: SNF2-related, N-terminal domain; IPR000953: Chromo/chromo shadow domain; IPR001650: Helicase, C-terminal; IPR001965: Zinc finger, PHD-type; IPR009462: Domain of unknown function DUF1086; IPR009463: Domain of unknown function DUF1087; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR016197: Chromo domain-like; IPR019786: Zinc finger, PHD-type, conserved site; IPR019787: Zinc finger, PHD-finger; IPR023780: Chromo domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS7B01G050100.1 [ Show all 6 ]
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring