Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS7A01G168300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS7A01G168300
Locus	TraesCS7A01G168300.1
URL	Pfam PF11942 [ Show all 19 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D6BU62|A0A1D6BU62_WHEAT Human Readable Description: Transcription elongation factor SPT5 Pfam IDs Description: PF11942: Spt5 transcription elongation factor, acidic N-terminal; PF03439: Early transcription elongation factor of RNA pol II, NGN section; PF00467: KOW motif InterPro IDs Description: IPR005100: Transcription elongation factor Spt5, NGN domain; IPR005824: KOW; IPR005825: Ribosomal protein L24/L26, conserved site; IPR006645: NusG, N-terminal; IPR008991: Translation protein SH3-like domain; IPR014722: Ribosomal protein L2 domain 2; IPR017071: Transcription elongation factor Spt5; IPR022581: Spt5 transcription elongation factor, N-terminal GO IDs Description via InterPro: GO:0003735 MF: structural constituent of ribosome; GO:0005622 CC: intracellular; GO:0005840 CC: ribosome; GO:0006355 BP: regulation of transcription, DNA-templated; GO:0006357 BP: regulation of transcription from RNA polymerase II promoter; GO:0006412 BP: translation; GO:0032784 BP: regulation of DNA-templated transcription, elongation
Type	Genomic
Sequence	TraesCS7A01G168300.1 TraesCS7A01G168300.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring