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GrainGenes Probe Report: TraesCS6B01G231100

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS6B01G231100
Locus
TraesCS6B01G231100.2
URL
Pfam PF06220
[ Show all 13 ]
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A1D6AM13|A0A1D6AM13_WHEAT
Human Readable Description: U1 small nuclear ribonucleoprotein C
Pfam IDs Description: PF06220: U1 zinc finger
InterPro IDs Description: IPR000690: Matrin/U1-C, C2H2-type zinc finger; IPR003604: Matrin/U1-C-like, C2H2-type zinc finger; IPR013085: U1-C, C2H2-type zinc finger; IPR013087: Zinc finger C2H2-type; IPR017340: U1 small nuclear ribonucleoprotein C
GO IDs Description via InterPro: GO:0000387 BP: spliceosomal snRNP assembly; GO:0000398 BP: mRNA splicing, via spliceosome; GO:0003676 MF: nucleic acid binding; GO:0005634 CC: nucleus; GO:0005685 CC: U1 snRNP; GO:0008270 MF: zinc ion binding
Type
Genomic
Sequence
TraesCS6B01G231100.1
TraesCS6B01G231100.2
Source Species
Triticum aetivum
Source Germplasm
Chinese Spring