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GrainGenes Probe Report: TraesCS6B01G224600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS6B01G224600
Locus	TraesCS6B01G224600.1
URL	Pfam PF12624 [ Show all 17 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A061SHU9|A0A061SHU9_9CHLO Human Readable Description: Calcium-dependent lipid-binding family protein isoform protein Pfam IDs Description: PF12624: N-terminal region of Chorein or VPS13; PF16908: Vacuolar sorting-associated protein 13, N-terminal; PF16910: Repeating coiled region of VPS13; PF06101: Plant protein of unknown function (DUF946); PF00168: C2 domain; PF06650: SHR-binding domain of vacuolar-sorting associated protein 13; PF16909: Vacuolar-sorting-associated 13 protein C-terminal InterPro IDs Description: IPR000008: C2 domain; IPR009291: Vacuolar protein sorting-associated protein 62; IPR009543: Vacuolar protein sorting-associated protein 13, SHR-binding domain; IPR011993: PH domain-like; IPR026854: Vacuolar protein sorting-associated protein 13, N-terminal domain; IPR031642: VPS13, repeated coiled region; IPR031645: Vacuolar protein sorting-associated protein 13, C-terminal; IPR031646: Vacuolar protein sorting-associated protein 13, second N-terminal domain GO IDs Description via InterPro: GO:0005515 MF: protein binding
Type	Genomic
Sequence	TraesCS6B01G224600.1 TraesCS6B01G224600.2
Source Species	Triticum aetivum
Source Germplasm	Chinese Spring