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GrainGenes Probe Report: TraesCS6B01G114600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS6B01G114600
Locus	TraesCS6B01G114600.2
URL	Pfam PF12894 [ Show all 17 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M7YJV4|M7YJV4_TRIUA Human Readable Description: Vacuolar protein sorting-associated protein 8-like protein Pfam IDs Description: PF12894: Anaphase-promoting complex subunit 4 WD40 domain; PF12816: Golgi CORVET complex core vacuolar protein 8; PF00637: Region in Clathrin and VPS InterPro IDs Description: IPR000547: Clathrin, heavy chain/VPS, 7-fold repeat; IPR001680: WD40 repeat; IPR001841: Zinc finger, RING-type; IPR011990: Tetratricopeptide-like helical domain; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR015943: WD40/YVTN repeat-like-containing domain; IPR017986: WD40-repeat-containing domain; IPR024977: Anaphase-promoting complex subunit 4, WD40 domain; IPR025941: Vacuolar protein sorting-associated protein 8, central domain GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0006886 BP: intracellular protein transport; GO:0008270 MF: zinc ion binding; GO:0016192 BP: vesicle-mediated transport
Type	Genomic
Sequence	TraesCS6B01G114600.1 TraesCS6B01G114600.2 TraesCS6B01G114600.3
Source Species	Triticum aetivum
Source Germplasm	Chinese Spring