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GrainGenes Probe Report: TraesCS6A01G392800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS6A01G392800
Locus	TraesCS6A01G392800.1
URL	Pfam PF00383 [ Show all 18 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M7YL93|M7YL93_TRIUA Human Readable Description: Riboflavin biosynthesis protein RibD Pfam IDs Description: PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region; PF01872: RibD C-terminal domain; PF08719: Domain of unknown function (DUF1768) InterPro IDs Description: IPR002125: Cytidine and deoxycytidylate deaminases, zinc-binding; IPR002734: Bacterial bifunctional deaminase-reductase, C-terminal; IPR004794: Riboflavin biosynthesis protein RibD; IPR011549: Riboflavin-specific deaminase, C-terminal; IPR012816: NADAR; IPR016193: Cytidine deaminase-like; IPR024072: Dihydrofolate reductase-like domain GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0008270 MF: zinc ion binding; GO:0008703 MF: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity; GO:0008835 MF: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity; GO:0009231 BP: riboflavin biosynthetic process; GO:0050661 MF: NADP binding; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS6A01G392800.1 TraesCS6A01G392800.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring