Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS6A01G225900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS6A01G225900
Locus	TraesCS6A01G225900.1
URL	Pfam PF08442 [ Show all 15 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|B2UMH5|SUCC_AKKM8 Human Readable Description: Succinate--CoA ligase [ADP-forming] subunit beta Pfam IDs Description: PF08442: ATP-grasp domain; PF00549: CoA-ligase InterPro IDs Description: IPR005809: Succinate--CoA synthetase, beta subunit; IPR005811: ATP-citrate lyase/succinyl-CoA ligase; IPR011761: ATP-grasp fold; IPR013650: ATP-grasp fold, succinyl-CoA synthetase-type; IPR013815: ATP-grasp fold, subdomain 1; IPR016102: Succinyl-CoA synthetase-like; IPR017866: Succinyl-CoA synthetase, beta subunit, conserved site GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0005524 MF: ATP binding; GO:0006099 BP: tricarboxylic acid cycle; GO:0008152 BP: metabolic process; GO:0046872 MF: metal ion binding
Type	Genomic
Sequence	TraesCS6A01G225900.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring