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GrainGenes Probe Report: TraesCS6A01G215500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS6A01G215500
Locus	TraesCS6A01G215500.1
URL	Pfam PF04551 [ Show all 11 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|Q6MD85|ISPG_PARUW Human Readable Description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) Pfam IDs Description: PF04551: GcpE protein InterPro IDs Description: IPR004588: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; IPR013785: Aldolase-type TIM barrel; IPR017178: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0005506 MF: iron ion binding; GO:0008299 BP: isoprenoid biosynthetic process; GO:0016114 BP: terpenoid biosynthetic process; GO:0046429 MF: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS6A01G215500.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring