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GrainGenes Probe Report: TraesCS6A01G194000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS6A01G194000
Locus	TraesCS6A01G194000.1
URL	Pfam PF00411 [ Show all 18 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A072TJJ2|A0A072TJJ2_MEDTR Human Readable Description: DNA-directed RNA polymerase subunit alpha Pfam IDs Description: PF00411: Ribosomal protein S11; PF01193: RNA polymerase Rpb3/Rpb11 dimerisation domain; PF01000: RNA polymerase Rpb3/RpoA insert domain; PF03118: Bacterial RNA polymerase, alpha chain C terminal domain InterPro IDs Description: IPR001971: Ribosomal protein S11; IPR009025: DNA-directed RNA polymerase, RBP11-like dimerisation domain; IPR011260: RNA polymerase, alpha subunit, C-terminal; IPR011262: DNA-directed RNA polymerase, insert domain; IPR011263: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; IPR011773: DNA-directed RNA polymerase, alpha subunit GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003735 MF: structural constituent of ribosome; GO:0003899 MF: DNA-directed 5'-3' RNA polymerase activity; GO:0005840 CC: ribosome; GO:0006351 BP: transcription, DNA-templated; GO:0006412 BP: translation; GO:0046983 MF: protein dimerization activity
Type	Genomic
Sequence	TraesCS6A01G194000.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring