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GrainGenes Probe Report: TraesCS5D01G211400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5D01G211400
Locus	TraesCS5D01G211400.1
URL	Pfam PF00538 [ Show all 14 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8AVN8|M8AVN8_AEGTA Human Readable Description: HMG-Y-related protein A Pfam IDs Description: PF00538: linker histone H1 and H5 family; PF02178: AT hook motif InterPro IDs Description: IPR000116: High mobility group protein HMGA; IPR000637: HMG-I/HMG-Y, DNA-binding, conserved site; IPR005818: Linker histone H1/H5, domain H15; IPR011991: Winged helix-turn-helix DNA-binding domain; IPR017956: AT hook, DNA-binding motif GO IDs Description via InterPro: GO:0000785 CC: chromatin; GO:0000786 CC: nucleosome; GO:0003677 MF: DNA binding; GO:0005634 CC: nucleus; GO:0006334 BP: nucleosome assembly; GO:0006355 BP: regulation of transcription, DNA-templated
Type	Genomic
Sequence	TraesCS5D01G211400.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring