GrainGenes Probe Report: TraesCS5D01G142900
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
TraesCS5D01G142900
Locus
TraesCS5D01G142900.2
URL
Pfam PF12515
[ Show all 24 ]
Reference
IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|M8B4B7|M8B4B7_AEGTA Human Readable Description: Calcium-transporting ATPase Pfam IDs Description: PF12515: Ca2+-ATPase N terminal autoinhibitory domain; PF00690: Cation transporter/ATPase, N-terminus; PF00122: E1-E2 ATPase; PF00702: haloacid dehalogenase-like hydrolase; PF00689: Cation transporting ATPase, C-terminus InterPro IDs Description: IPR001757: P-type ATPase; IPR004014: Cation-transporting P-type ATPase, N-terminal; IPR006068: Cation-transporting P-type ATPase, C-terminal; IPR006408: P-type ATPase, subfamily IIB; IPR008250: P-type ATPase, A domain; IPR018303: P-type ATPase, phosphorylation site; IPR023214: HAD-like domain; IPR023298: P-type ATPase, transmembrane domain; IPR023299: P-type ATPase, cytoplasmic domain N; IPR024750: Calcium-transporting P-type ATPase, N-terminal autoinhibitory domain GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0005388 MF: calcium-transporting ATPase activity; GO:0005516 MF: calmodulin binding; GO:0005524 MF: ATP binding; GO:0016020 CC: membrane; GO:0016021 CC: integral component of membrane; GO:0046872 MF: metal ion binding; GO:0070588 BP: calcium ion transmembrane transport
Type
Genomic
Sequence
TraesCS5D01G142900.1 TraesCS5D01G142900.2
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
GrainGenes Probe Report: TraesCS5D01G142900
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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