Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS5A01G557300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G557300
Locus	TraesCS5A01G557300.1
URL	Pfam PF01602 [ Show all 20 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1E5UTI0|A0A1E5UTI0_9POAL Human Readable Description: AP-2 complex subunit alpha-2 Pfam IDs Description: PF01602: Adaptin N terminal region; PF02883: Adaptin C-terminal domain; PF02296: Alpha adaptin AP2, C-terminal domain InterPro IDs Description: IPR002553: Clathrin/coatomer adaptor, adaptin-like, N-terminal; IPR003164: Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain; IPR008152: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; IPR009028: Coatomer/calthrin adaptor appendage, C-terminal subdomain; IPR011989: Armadillo-like helical; IPR013041: Coatomer/clathrin adaptor appendage, Ig-like subdomain; IPR016024: Armadillo-type fold; IPR017104: Adaptor protein complex AP-2, alpha subunit GO IDs Description via InterPro: GO:0005488 MF: binding; GO:0006886 BP: intracellular protein transport; GO:0008565 MF: protein transporter activity; GO:0015031 BP: protein transport; GO:0016020 CC: membrane; GO:0016192 BP: vesicle-mediated transport; GO:0030117 CC: membrane coat; GO:0030131 CC: clathrin adaptor complex
Type	Genomics
Sequence	TraesCS5A01G557300.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring