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GrainGenes Probe Report: TraesCS5A01G534900

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS5A01G534900
Locus
TraesCS5A01G534900.1
URL
Pfam PF04086
[ Show all 17 ]
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A0A0KIP4|A0A0A0KIP4_CUCSA
Human Readable Description: Signal recognition particle protein
Pfam IDs Description: PF04086: Signal recognition particle, alpha subunit, N-terminal; PF02881: SRP54-type protein, helical bundle domain; PF00448: SRP54-type protein, GTPase domain
InterPro IDs Description: IPR000897: Signal recognition particle, SRP54 subunit, GTPase domain; IPR003593: AAA+ ATPase domain; IPR007222: Signal recognition particle receptor, alpha subunit, N-terminal; IPR011012: Longin-like domain; IPR013822: Signal recognition particle, SRP54 subunit, helical bundle; IPR027417: P-loop containing nucleoside triphosphate hydrolase
GO IDs Description via InterPro: GO:0003924 MF: GTPase activity; GO:0005047 MF: signal recognition particle binding; GO:0005525 MF: GTP binding; GO:0005785 CC: signal recognition particle receptor complex; GO:0006614 BP: SRP-dependent cotranslational protein targeting to membrane; GO:0006810 BP: transport; GO:0006886 BP: intracellular protein transport
Type
Genomics
Sequence
TraesCS5A01G534900.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring