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GrainGenes Probe Report: TraesCS5A01G499900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G499900
Locus	TraesCS5A01G499900.1
URL	Pfam PF08414 [ Show all 21 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|Q84KK7|Q84KK7_NICBE Human Readable Description: Respiratory burst oxidase homolog Pfam IDs Description: PF08414: Respiratory burst NADPH oxidase; PF01794: Ferric reductase like transmembrane component; PF08022: FAD-binding domain; PF08030: Ferric reductase NAD binding domain InterPro IDs Description: IPR000778: Cytochrome b245, heavy chain; IPR002048: EF-hand domain; IPR011992: EF-hand domain pair; IPR013112: FAD-binding 8; IPR013121: Ferric reductase, NAD binding domain; IPR013130: Ferric reductase transmembrane component-like domain; IPR013623: NADPH oxidase Respiratory burst; IPR017927: Ferredoxin reductase-type FAD-binding domain; IPR017938: Riboflavin synthase-like beta-barrel; IPR018247: EF-Hand 1, calcium-binding site GO IDs Description via InterPro: GO:0004601 MF: peroxidase activity; GO:0005509 MF: calcium ion binding; GO:0016020 CC: membrane; GO:0016491 MF: oxidoreductase activity; GO:0050664 MF: oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor; GO:0055114 BP: oxidation-reduction process
Type	Genomics
Sequence	TraesCS5A01G499900.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring