Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS5A01G459100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G459100
Locus	TraesCS5A01G459100.1
URL	Pfam PF00295 [ Show all 8 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: AT1G80170.1 Human Readable Description: Pectin lyase-like superfamily protein Pfam IDs Description: PF00295: Glycosyl hydrolases family 28 InterPro IDs Description: IPR000743: Glycoside hydrolase, family 28; IPR006626: Parallel beta-helix repeat; IPR011050: Pectin lyase fold/virulence factor; IPR012334: Pectin lyase fold GO IDs Description via InterPro: GO:0004650 MF: polygalacturonase activity; GO:0005975 BP: carbohydrate metabolic process
Type	Genomics
Sequence	TraesCS5A01G459100.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring