Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS5A01G443200

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G443200
Locus	TraesCS5A01G443200.1
URL	Pfam PF12047 [ Show all 12 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5Z514|A0A1D5Z514_WHEAT Human Readable Description: Cytosine-specific methyltransferase Pfam IDs Description: PF12047: Cytosine specific DNA methyltransferase replication foci domain; PF01426: BAH domain; PF00145: C-5 cytosine-specific DNA methylase InterPro IDs Description: IPR001025: Bromo adjacent homology (BAH) domain; IPR001525: C-5 cytosine methyltransferase; IPR018117: DNA methylase, C-5 cytosine-specific, active site; IPR022702: DNA (cytosine-5)-methyltransferase 1, replication foci domain; IPR029063: S-adenosyl-L-methionine-dependent methyltransferase; IPR031303: DNA methylase, C-5 cytosine-specific, conserved site GO IDs Description via InterPro: GO:0003682 MF: chromatin binding; GO:0008168 MF: methyltransferase activity
Type	Genomics
Sequence	TraesCS5A01G443200.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring