Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS5A01G390300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G390300
Locus	TraesCS5A01G390300.2
URL	Pfam PF00569 [ Show all 15 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8APJ5|M8APJ5_TRIUA Human Readable Description: Transcriptional adapter ADA2 Pfam IDs Description: PF00569: Zinc finger, ZZ type; PF00249: Myb-like DNA-binding domain InterPro IDs Description: IPR000433: Zinc finger, ZZ-type; IPR001005: SANT/Myb domain; IPR007526: SWIRM domain; IPR009057: Homeobox domain-like; IPR016827: Transcriptional adaptor 2; IPR017884: SANT domain GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003713 MF: transcription coactivator activity; GO:0005515 MF: protein binding; GO:0006357 BP: regulation of transcription from RNA polymerase II promoter; GO:0008270 MF: zinc ion binding; GO:0035065 BP: regulation of histone acetylation
Type	Genomics
Sequence	TraesCS5A01G390300.1 TraesCS5A01G390300.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring