Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS5A01G220000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G220000
Locus	TraesCS5A01G220000.1
URL	Pfam PF05470 [ Show all 13 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|W5FVU1|W5FVU1_WHEAT Human Readable Description: Eukaryotic translation initiation factor 3 subunit C Pfam IDs Description: PF05470: Eukaryotic translation initiation factor 3 subunit 8 N-terminus; PF01399: PCI domain InterPro IDs Description: IPR000717: Proteasome component (PCI) domain; IPR008905: Eukaryotic translation initiation factor 3 subunit C, N-terminal domain; IPR011991: Winged helix-turn-helix DNA-binding domain; IPR027516: Eukaryotic translation initiation factor 3 subunit C GO IDs Description via InterPro: GO:0003723 MF: RNA binding; GO:0003743 MF: translation initiation factor activity; GO:0005515 MF: protein binding; GO:0005852 CC: eukaryotic translation initiation factor 3 complex; GO:0006413 BP: translational initiation; GO:0031369 MF: translation initiation factor binding
Type	Genomics
Sequence	TraesCS5A01G220000.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring