Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS5A01G214500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G214500
Locus	TraesCS5A01G214500.1
URL	Pfam PF01171 [ Show all 12 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|T2DND8|T2DND8_PHAVU Human Readable Description: Cytoplasmic tRNA 2-thiolation protein Pfam IDs Description: PF01171: PP-loop family; PF16503: Zinc-ribbon InterPro IDs Description: IPR000541: Cytoplasmic tRNA 2-thiolation protein 1; IPR011063: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal; IPR012089: 2-thiocytidine tRNA biosynthesis protein, TtcA; IPR014729: Rossmann-like alpha/beta/alpha sandwich fold; IPR032442: Cytoplasmic tRNA 2-thiolation protein 1, C-terminal GO IDs Description via InterPro: GO:0000049 MF: tRNA binding; GO:0002098 BP: tRNA wobble uridine modification; GO:0008033 BP: tRNA processing; GO:0034227 BP: tRNA thio-modification
Type	Genomics
Sequence	TraesCS5A01G214500.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring