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GrainGenes Probe Report: TraesCS5A01G121600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G121600
Locus	TraesCS5A01G121600.1
URL	Pfam PF06012 [ Show all 17 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D1YQV7|A0A1D1YQV7_9ARAE Human Readable Description: E3 ubiquitin-protein ligase Pfam IDs Description: PF06012: Domain of Unknown Function (DUF908); PF06025: Domain of Unknown Function (DUF913); PF00627: UBA/TS-N domain; PF14377: Domain of unknown function (DUF4414); PF00632: HECT-domain (ubiquitin-transferase) InterPro IDs Description: IPR000569: HECT domain; IPR009060: UBA-like; IPR010309: E3 ubiquitin ligase, domain of unknown function DUF908; IPR010314: E3 ubiquitin ligase, domain of unknown function DUF913; IPR011989: Armadillo-like helical; IPR015940: Ubiquitin-associated domain; IPR016024: Armadillo-type fold; IPR025527: Domain of unknown function DUF4414 GO IDs Description via InterPro: GO:0004842 MF: ubiquitin-protein transferase activity; GO:0005488 MF: binding; GO:0005515 MF: protein binding
Type	Genomics
Sequence	TraesCS5A01G121600.1 TraesCS5A01G121600.2 TraesCS5A01G121600.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring