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GrainGenes Probe Report: TraesCS5A01G100700

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G100700
Locus	TraesCS5A01G100700.1
URL	Pfam PF03483 [ Show all 20 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|Q9VCA5|SYFB_DROME Human Readable Description: Phenylalanine--tRNA ligase beta subunit Pfam IDs Description: PF03483: B3/4 domain; PF03484: tRNA synthetase B5 domain; PF01409: tRNA synthetases class II core domain (F) InterPro IDs Description: IPR002319: Phenylalanyl-tRNA synthetase; IPR004531: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic; IPR005146: B3/B4 tRNA-binding domain; IPR005147: tRNA synthetase, B5-domain; IPR009061: Putative DNA-binding domain; IPR020825: Phenylalanyl-tRNA synthetase, B3/B4 GO IDs Description via InterPro: GO:0000049 MF: tRNA binding; GO:0000166 MF: nucleotide binding; GO:0000287 MF: magnesium ion binding; GO:0003723 MF: RNA binding; GO:0004812 MF: aminoacyl-tRNA ligase activity; GO:0004826 MF: phenylalanine-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0006432 BP: phenylalanyl-tRNA aminoacylation; GO:0043039 BP: tRNA aminoacylation
Type	Genomics
Sequence	TraesCS5A01G100700.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring