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GrainGenes Probe Report: TraesCS5A01G051500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G051500
Locus	TraesCS5A01G051500.1
URL	Pfam PF03731 [ Show all 21 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M7ZL43|M7ZL43_TRIUA Human Readable Description: ATP-dependent DNA helicase 2 subunit KU70 Pfam IDs Description: PF03731: Ku70/Ku80 N-terminal alpha/beta domain; PF02735: Ku70/Ku80 beta-barrel domain; PF03730: Ku70/Ku80 C-terminal arm; PF02037: SAP domain InterPro IDs Description: IPR002035: von Willebrand factor, type A; IPR003034: SAP domain; IPR005160: Ku70/Ku80 C-terminal arm; IPR005161: Ku70/Ku80, N-terminal alpha/beta; IPR006164: Ku70/Ku80 beta-barrel domain; IPR006165: Ku70; IPR016194: SPOC-like, C-terminal domain; IPR027388: Ku70, bridge and pillars domain GO IDs Description via InterPro: GO:0000723 BP: telomere maintenance; GO:0003677 MF: DNA binding; GO:0003684 MF: damaged DNA binding; GO:0004003 MF: ATP-dependent DNA helicase activity; GO:0005634 CC: nucleus; GO:0006303 BP: double-strand break repair via nonhomologous end joining; GO:0042162 MF: telomeric DNA binding; GO:0043564 CC: Ku70:Ku80 complex
Type	Genomics
Sequence	TraesCS5A01G051500.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring