Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS5A01G015900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G015900
Locus	TraesCS5A01G015900.1
URL	Pfam PF13456 [ Show all 11 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: AT4G19670.7 Human Readable Description: RING/U-box superfamily protein Pfam IDs Description: PF13456: Reverse transcriptase-like; PF01485: IBR domain, a half RING-finger domain InterPro IDs Description: IPR001841: Zinc finger, RING-type; IPR002867: IBR domain; IPR012337: Ribonuclease H-like domain; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR017907: Zinc finger, RING-type, conserved site GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0005515 MF: protein binding; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS5A01G015900.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring