Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS4D01G284400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G284400
Locus	TraesCS4D01G284400.1
URL	Pfam PF00128 [ Show all 13 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5XY59|A0A1D5XY59_WHEAT Human Readable Description: Alpha-amylase Pfam IDs Description: PF00128: Alpha amylase, catalytic domain; PF07821: Alpha-amylase C-terminal beta-sheet domain InterPro IDs Description: IPR006046: Alpha amylase; IPR006047: Glycosyl hydrolase, family 13, catalytic domain; IPR012850: Alpha-amylase, C-terminal beta-sheet; IPR013775: Alpha-amylase, plant; IPR017853: Glycoside hydrolase superfamily GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0004556 MF: alpha-amylase activity; GO:0005509 MF: calcium ion binding; GO:0005975 BP: carbohydrate metabolic process; GO:0043169 MF: cation binding
Type	Genomic
Sequence	TraesCS4D01G284400.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring