Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS4D01G243900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G243900
Locus	TraesCS4D01G243900.1
URL	Pfam PF09334 [ Show all 20 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0K9PI83|A0A0K9PI83_ZOSMR Human Readable Description: Methionine--tRNA ligase Pfam IDs Description: PF09334: tRNA synthetases class I (M); PF01588: Putative tRNA binding domain InterPro IDs Description: IPR002547: tRNA-binding domain; IPR009080: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding; IPR012340: Nucleic acid-binding, OB-fold; IPR014729: Rossmann-like alpha/beta/alpha sandwich fold; IPR014758: Methionyl-tRNA synthetase; IPR015413: Methionyl/Leucyl tRNA synthetase; IPR023458: Methionine-tRNA ligase, type 1; IPR029038: Methionyl-tRNA synthetase, Zn-domain; IPR033911: Methioninyl-tRNA synthetase core domain GO IDs Description via InterPro: GO:0000049 MF: tRNA binding; GO:0000166 MF: nucleotide binding; GO:0004812 MF: aminoacyl-tRNA ligase activity; GO:0004825 MF: methionine-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0006418 BP: tRNA aminoacylation for protein translation; GO:0006431 BP: methionyl-tRNA aminoacylation
Type	Genomic
Sequence	TraesCS4D01G243900.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring