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GrainGenes Probe Report: TraesCS4D01G142800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G142800
Locus	TraesCS4D01G142800.1
URL	Pfam PF00722 [ Show all 16 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5XSR2|A0A1D5XSR2_WHEAT Human Readable Description: Xyloglucan endotransglucosylase/hydrolase Pfam IDs Description: PF00722: Glycosyl hydrolases family 16; PF06955: Xyloglucan endo-transglycosylase (XET) C-terminus InterPro IDs Description: IPR000757: Glycoside hydrolase family 16; IPR008263: Glycoside hydrolase, family 16, active site; IPR010713: Xyloglucan endo-transglycosylase, C-terminal; IPR013320: Concanavalin A-like lectin/glucanase domain; IPR016455: Xyloglucan endotransglucosylase/hydrolase GO IDs Description via InterPro: GO:0004553 MF: hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005618 CC: cell wall; GO:0005975 BP: carbohydrate metabolic process; GO:0006073 BP: cellular glucan metabolic process; GO:0010411 BP: xyloglucan metabolic process; GO:0016762 MF: xyloglucan:xyloglucosyl transferase activity; GO:0042546 BP: cell wall biogenesis; GO:0048046 CC: apoplast
Type	Genomic
Sequence	TraesCS4D01G142800.1 TraesCS4D01G142800.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring