GrainGenes Probe Report: TraesCS4D01G055000
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
TraesCS4D01G055000
Locus
TraesCS4D01G055000.1
URL
Pfam PF01411
[ Show all 21 ]
Reference
IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A1D6S0H3|A0A1D6S0H3_WHEAT Human Readable Description: Alanine--tRNA ligase Pfam IDs Description: PF01411: tRNA synthetases class II (A); PF07973: Threonyl and Alanyl tRNA synthetase second additional domain; PF02272: DHHA1 domain InterPro IDs Description: IPR002318: Alanine-tRNA ligase, class IIc; IPR003156: DHHA1 domain; IPR009000: Translation protein, beta-barrel domain; IPR012947: Threonyl/alanyl tRNA synthetase, SAD; IPR018162: Alanine-tRNA ligase, class IIc, anti-codon-binding domain; IPR018163: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain; IPR018164: Alanyl-tRNA synthetase, class IIc, N-terminal; IPR018165: Alanyl-tRNA synthetase, class IIc, core domain; IPR023033: Alanine-tRNA ligase, eukaryota/bacteria GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0003676 MF: nucleic acid binding; GO:0004813 MF: alanine-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0006419 BP: alanyl-tRNA aminoacylation; GO:0016876 MF: ligase activity, forming aminoacyl-tRNA and related compounds; GO:0043039 BP: tRNA aminoacylation
Type
Genomic
Sequence
TraesCS4D01G055000.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
GrainGenes Probe Report: TraesCS4D01G055000
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
|
| ||||||
|
| ||||||
|
| ||||||
|
| ||||||
|
| ||||||
|
| ||||||
|
| ||||||
|
| ||||||
|
|