Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS4D01G027900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G027900
Locus	TraesCS4D01G027900.1
URL	Pfam PF00690 [ Show all 17 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|W5EPK5|W5EPK5_WHEAT Human Readable Description: Plasma membrane ATPase Pfam IDs Description: PF00690: Cation transporter/ATPase, N-terminus; PF00122: E1-E2 ATPase; PF00702: haloacid dehalogenase-like hydrolase InterPro IDs Description: IPR001757: P-type ATPase; IPR004014: Cation-transporting P-type ATPase, N-terminal; IPR006534: P-type ATPase, subfamily IIIA; IPR008250: P-type ATPase, A domain; IPR018303: P-type ATPase, phosphorylation site; IPR023214: HAD-like domain; IPR023298: P-type ATPase, transmembrane domain; IPR023299: P-type ATPase, cytoplasmic domain N GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0006754 BP: ATP biosynthetic process; GO:0016021 CC: integral component of membrane; GO:0016887 MF: ATPase activity; GO:0046872 MF: metal ion binding
Type	Genomic
Sequence	TraesCS4D01G027900.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring