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GrainGenes Probe Report: TraesCS4B01G163100

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS4B01G163100
Locus
TraesCS4B01G163100.3
URL
Pfam PF04810
[ Show all 17 ]
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A199VE89|A0A199VE89_ANACO
Human Readable Description: Protein transport protein SEC23
Pfam IDs Description: PF04810: Sec23/Sec24 zinc finger; PF04811: Sec23/Sec24 trunk domain; PF08033: Sec23/Sec24 beta-sandwich domain; PF04815: Sec23/Sec24 helical domain; PF00626: Gelsolin repeat
InterPro IDs Description: IPR002035: von Willebrand factor, type A; IPR006895: Zinc finger, Sec23/Sec24-type; IPR006896: Sec23/Sec24, trunk domain; IPR006900: Sec23/Sec24, helical domain; IPR007123: Gelsolin-like domain; IPR012990: Sec23/Sec24 beta-sandwich; IPR029006: ADF-H/Gelsolin-like domain
GO IDs Description via InterPro: GO:0006886 BP: intracellular protein transport; GO:0006888 BP: ER to Golgi vesicle-mediated transport; GO:0008270 MF: zinc ion binding; GO:0030127 CC: COPII vesicle coat
Type
Genomic
Sequence
TraesCS4B01G163100.1
TraesCS4B01G163100.2
TraesCS4B01G163100.3
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring