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GrainGenes Probe Report: TraesCS4B01G052000

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS4B01G052000
Locus
TraesCS4B01G052000.1
URL
Pfam PF08446
[ Show all 17 ]
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A096URM5|A0A096URM5_WHEAT
Human Readable Description: Phytochrome
Pfam IDs Description: PF08446: PAS fold; PF01590: GAF domain; PF00360: Phytochrome region; PF00989: PAS fold
InterPro IDs Description: IPR000014: PAS domain; IPR001294: Phytochrome; IPR003018: GAF domain; IPR013515: Phytochrome, central region; IPR013654: PAS fold-2; IPR013767: PAS fold; IPR016132: Phytochrome chromophore attachment domain; IPR029016: GAF domain-like
GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0006355 BP: regulation of transcription, DNA-templated; GO:0009584 BP: detection of visible light; GO:0018298 BP: protein-chromophore linkage
Type
Genomic
Sequence
TraesCS4B01G052000.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring