Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS4A01G234700

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4A01G234700
Locus	TraesCS4A01G234700.1
URL	Pfam PF00690 [ Show all 22 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8AJX4|M8AJX4_TRIUA Human Readable Description: Calcium-transporting ATPase Pfam IDs Description: PF00690: Cation transporter/ATPase, N-terminus; PF00122: E1-E2 ATPase; PF13246: Cation transport ATPase (P-type); PF08282: haloacid dehalogenase-like hydrolase; PF00689: Cation transporting ATPase, C-terminus InterPro IDs Description: IPR001757: P-type ATPase; IPR004014: Cation-transporting P-type ATPase, N-terminal; IPR006068: Cation-transporting P-type ATPase, C-terminal; IPR006408: P-type ATPase, subfamily IIB; IPR008250: P-type ATPase, A domain; IPR018303: P-type ATPase, phosphorylation site; IPR023214: HAD-like domain; IPR023298: P-type ATPase, transmembrane domain; IPR023299: P-type ATPase, cytoplasmic domain N GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0005388 MF: calcium-transporting ATPase activity; GO:0005524 MF: ATP binding; GO:0016020 CC: membrane; GO:0016021 CC: integral component of membrane; GO:0046872 MF: metal ion binding; GO:0070588 BP: calcium ion transmembrane transport
Type	Genomic
Sequence	TraesCS4A01G234700.1 TraesCS4A01G234700.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring