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GrainGenes Probe Report: TraesCS4A01G162000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4A01G162000
Locus	TraesCS4A01G162000.1
URL	Pfam PF13923 [ Show all 11 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A199W9U5|A0A199W9U5_ANACO Human Readable Description: E3 ubiquitin-protein ligase Pfam IDs Description: PF13923: Zinc finger, C3HC4 type (RING finger); PF02190: ATP-dependent protease La (LON) substrate-binding domain InterPro IDs Description: IPR001841: Zinc finger, RING-type; IPR003111: Lon, substrate-binding domain; IPR011990: Tetratricopeptide-like helical domain; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR015947: PUA-like domain; IPR017907: Zinc finger, RING-type, conserved site GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS4A01G162000.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring