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GrainGenes Probe Report: TraesCS4A01G084400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4A01G084400
Locus	TraesCS4A01G084400.1
URL	Pfam PF00117 [ Show all 18 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|B9SVA2|B9SVA2_RICCO Human Readable Description: Imidazole glycerol phosphate synthase subunit hisf, putative Pfam IDs Description: PF00117: Glutamine amidotransferase class-I; PF00977: Histidine biosynthesis protein InterPro IDs Description: IPR004651: Histidine biosynthesis, HisF; IPR006062: Histidine biosynthesis; IPR010139: Imidazole glycerol phosphate synthase, subunit H; IPR011060: Ribulose-phosphate binding barrel; IPR013785: Aldolase-type TIM barrel; IPR014640: Imidazole glycerol phosphate synthase HisHF; IPR017926: Glutamine amidotransferase; IPR029062: Class I glutamine amidotransferase-like GO IDs Description via InterPro: GO:0000105 BP: histidine biosynthetic process; GO:0000107 MF: imidazoleglycerol-phosphate synthase activity; GO:0003824 MF: catalytic activity; GO:0005737 CC: cytoplasm; GO:0008152 BP: metabolic process; GO:0016763 MF: transferase activity, transferring pentosyl groups; GO:0016833 MF: oxo-acid-lyase activity
Type	Genomic
Sequence	TraesCS4A01G084400.1 TraesCS4A01G084400.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring