Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS3D01G381800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3D01G381800
Locus	TraesCS3D01G381800.1
URL	Pfam PF02900 [ Show all 10 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0G2UQT9|A0A0G2UQT9_9CARY Human Readable Description: 4, 5-dioxygenase-like protein Pfam IDs Description: PF02900: Catalytic LigB subunit of aromatic ring-opening dioxygenase InterPro IDs Description: IPR004183: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; IPR014436: Extradiol aromatic ring-opening dioxygenase, DODA-type GO IDs Description via InterPro: GO:0006725 BP: cellular aromatic compound metabolic process; GO:0008198 MF: ferrous iron binding; GO:0008270 MF: zinc ion binding; GO:0016491 MF: oxidoreductase activity; GO:0016701 MF: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS3D01G381800.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring