Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS3D01G266400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3D01G266400
Locus	TraesCS3D01G266400.1
URL	Pfam PF00310 [ Show all 33 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|B9RII5|B9RII5_RICCO Human Readable Description: Glutamate synthase, putative Pfam IDs Description: PF00310: Glutamine amidotransferases class-II; PF04898: Glutamate synthase central domain; PF01645: Conserved region in glutamate synthase; PF01493: GXGXG motif; PF14691: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; PF07992: Pyridine nucleotide-disulphide oxidoreductase InterPro IDs Description: IPR002489: Glutamate synthase, alpha subunit, C-terminal; IPR002932: Glutamate synthase domain; IPR006005: Glutamate synthase, NADH/NADPH, small subunit 1; IPR006982: Glutamate synthase, central-N; IPR009051: Alpha-helical ferredoxin; IPR012220: Glutamate synthase, eukaryotic; IPR013785: Aldolase-type TIM barrel; IPR017932: Glutamine amidotransferase type 2 domain; IPR023753: FAD/NAD(P)-binding domain; IPR028261: Dihydroprymidine dehydrogenase domain II; IPR029055: Nucleophile aminohydrolases, N-terminal GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0005506 MF: iron ion binding; GO:0006537 BP: glutamate biosynthetic process; GO:0006807 BP: nitrogen compound metabolic process; GO:0008152 BP: metabolic process; GO:0010181 MF: FMN binding; GO:0015930 MF: glutamate synthase activity; GO:0016040 MF: glutamate synthase (NADH) activity; GO:0016491 MF: oxidoreductase activity; GO:0016638 MF: oxidoreductase activity, acting on the CH-NH2 group of donors; GO:0016639 MF: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor; GO:0045181 MF: glutamate synthase activity, NAD(P)H as acceptor; GO:0050660 MF: flavin adenine dinucleotide binding; GO:0051536 MF: iron-sulfur cluster binding; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS3D01G266400.1 TraesCS3D01G266400.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring