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GrainGenes Probe Report: TraesCS3D01G113800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3D01G113800
Locus	TraesCS3D01G113800.1
URL	Pfam PF04558 [ Show all 26 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1E5VK25|A0A1E5VK25_9POAL Human Readable Description: Glutamine--tRNA ligase Pfam IDs Description: PF04558: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1; PF04557: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2; PF00749: tRNA synthetases class I (E and Q), catalytic domain; PF03950: tRNA synthetases class I (E and Q), anti-codon binding domain InterPro IDs Description: IPR000924: Glutamyl/glutaminyl-tRNA synthetase; IPR001412: Aminoacyl-tRNA synthetase, class I, conserved site; IPR004514: Glutamine-tRNA synthetase; IPR007638: Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2; IPR007639: Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal; IPR011035: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; IPR014729: Rossmann-like alpha/beta/alpha sandwich fold; IPR020056: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain; IPR020058: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain; IPR020059: Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain; IPR020061: Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0004812 MF: aminoacyl-tRNA ligase activity; GO:0004819 MF: glutamine-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0006412 BP: translation; GO:0006418 BP: tRNA aminoacylation for protein translation; GO:0006425 BP: glutaminyl-tRNA aminoacylation; GO:0016876 MF: ligase activity, forming aminoacyl-tRNA and related compounds; GO:0043039 BP: tRNA aminoacylation
Type	Genomic
Sequence	TraesCS3D01G113800.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring