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GrainGenes Probe Report: TraesCS3B01G547900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3B01G547900
Locus	TraesCS3B01G547900.1
URL	Pfam PF00156 [ Show all 20 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0K9PNV6|A0A0K9PNV6_ZOSMR Human Readable Description: Orotate phosphoribosyltransferase, Orotidine-5'-phosphate decarboxylase Pfam IDs Description: PF00156: Phosphoribosyl transferase domain; PF00215: Orotidine 5'-phosphate decarboxylase / HUMPS family InterPro IDs Description: IPR000836: Phosphoribosyltransferase domain; IPR001754: Orotidine 5'-phosphate decarboxylase domain; IPR004467: Orotate phosphoribosyl transferase domain; IPR011060: Ribulose-phosphate binding barrel; IPR013785: Aldolase-type TIM barrel; IPR014732: Orotidine 5'-phosphate decarboxylase; IPR018089: Orotidine 5'-phosphate decarboxylase, active site; IPR023031: Orotate phosphoribosyltransferase; IPR029057: Phosphoribosyltransferase-like GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0004588 MF: orotate phosphoribosyltransferase activity; GO:0004590 MF: orotidine-5'-phosphate decarboxylase activity; GO:0006207 BP: 'de novo' pyrimidine nucleobase biosynthetic process; GO:0006221 BP: pyrimidine nucleotide biosynthetic process; GO:0008152 BP: metabolic process; GO:0009116 BP: nucleoside metabolic process; GO:0044205 BP: 'de novo' UMP biosynthetic process
Type	Genomic
Sequence	TraesCS3B01G547900.1 TraesCS3B01G547900.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring