Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS3A01G415400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G415400
Locus	TraesCS3A01G415400.2
URL	Pfam PF04851 [ Show all 21 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1J3J3H8|A0A1J3J3H8_NOCCA Human Readable Description: Endoribonuclease Dicer-like protein 3 Pfam IDs Description: PF04851: Type III restriction enzyme, res subunit; PF00271: Helicase conserved C-terminal domain; PF03368: Dicer dimerisation domain; PF02170: PAZ domain; PF00636: Ribonuclease III domain InterPro IDs Description: IPR000999: Ribonuclease III domain; IPR001650: Helicase, C-terminal; IPR003100: PAZ domain; IPR005034: Dicer dimerisation domain; IPR006935: Helicase/UvrB, N-terminal; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR014720: Double-stranded RNA-binding domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0004525 MF: ribonuclease III activity; GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0006396 BP: RNA processing; GO:0016787 MF: hydrolase activity; GO:0016891 MF: endoribonuclease activity, producing 5'-phosphomonoesters
Type	Genomic
Sequence	TraesCS3A01G415400.1 TraesCS3A01G415400.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring