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GrainGenes Probe Report: TraesCS3A01G146800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G146800
Locus	TraesCS3A01G146800.1
URL	Pfam PF00389 [ Show all 20 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D6DHY9|A0A1D6DHY9_WHEAT Human Readable Description: D-3-phosphoglycerate dehydrogenase Pfam IDs Description: PF00389: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PF02826: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; PF01842: ACT domain InterPro IDs Description: IPR002912: ACT domain; IPR006139: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; IPR006140: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain; IPR006236: D-3-phosphoglycerate dehydrogenase; IPR015878: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; IPR016040: NAD(P)-binding domain; IPR029009: Allosteric substrate binding domain; IPR029752: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1; IPR029753: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site GO IDs Description via InterPro: GO:0004617 MF: phosphoglycerate dehydrogenase activity; GO:0006564 BP: L-serine biosynthetic process; GO:0008152 BP: metabolic process; GO:0016597 MF: amino acid binding; GO:0016616 MF: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0051287 MF: NAD binding; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS3A01G146800.1 TraesCS3A01G146800.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring