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GrainGenes Probe Report: TraesCS3A01G122900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G122900
Locus	TraesCS3A01G122900.1
URL	Pfam PF02148 [ Show all 18 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5VH80|A0A1D5VH80_WHEAT Human Readable Description: Ubiquitinyl hydrolase 1 Pfam IDs Description: PF02148: Zn-finger in ubiquitin-hydrolases and other protein; PF00443: Ubiquitin carboxyl-terminal hydrolase; PF00627: UBA/TS-N domain InterPro IDs Description: IPR001394: Peptidase C19, ubiquitin carboxyl-terminal hydrolase; IPR001607: Zinc finger, UBP-type; IPR009060: UBA-like; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR015940: Ubiquitin-associated domain; IPR016652: Ubiquitinyl hydrolase; IPR018200: Ubiquitin specific protease, conserved site; IPR028889: Ubiquitin specific protease domain GO IDs Description via InterPro: GO:0004843 MF: thiol-dependent ubiquitin-specific protease activity; GO:0005515 MF: protein binding; GO:0006511 BP: ubiquitin-dependent protein catabolic process; GO:0008270 MF: zinc ion binding; GO:0016579 BP: protein deubiquitination; GO:0036459 MF: thiol-dependent ubiquitinyl hydrolase activity
Type	Genomic
Sequence	TraesCS3A01G122900.1 TraesCS3A01G122900.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring