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GrainGenes Probe Report: TraesCS3A01G086700

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G086700
Locus	TraesCS3A01G086700.2
URL	Pfam PF00378 [ Show all 19 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|A8A2L0|FADJ_ECOHS Human Readable Description: Fatty acid oxidation complex subunit alpha Pfam IDs Description: PF00378: Enoyl-CoA hydratase/isomerase; PF02737: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; PF00725: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain InterPro IDs Description: IPR001753: Crotonase superfamily; IPR006108: 3-hydroxyacyl-CoA dehydrogenase, C-terminal; IPR006176: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; IPR006180: 3-hydroxyacyl-CoA dehydrogenase, conserved site; IPR008927: 6-phosphogluconate dehydrogenase C-terminal domain-like; IPR013328: 6-phosphogluconate dehydrogenase, domain 2; IPR016040: NAD(P)-binding domain; IPR018376: Enoyl-CoA hydratase/isomerase, conserved site; IPR029045: ClpP/crotonase-like domain GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0003857 MF: 3-hydroxyacyl-CoA dehydrogenase activity; GO:0006631 BP: fatty acid metabolic process; GO:0008152 BP: metabolic process; GO:0016491 MF: oxidoreductase activity; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS3A01G086700.1 TraesCS3A01G086700.2 TraesCS3A01G086700.3 TraesCS3A01G086700.4
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring