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GrainGenes Probe Report: TraesCS3A01G024100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G024100
Locus	TraesCS3A01G024100.2
URL	Pfam PF01411 [ Show all 15 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1J3ET73|A0A1J3ET73_NOCCA Human Readable Description: Alanine--tRNA ligase Pfam IDs Description: PF01411: tRNA synthetases class II (A); PF07973: Threonyl and Alanyl tRNA synthetase second additional domain InterPro IDs Description: IPR009000: Translation protein, beta-barrel domain; IPR012947: Threonyl/alanyl tRNA synthetase, SAD; IPR018163: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain; IPR018164: Alanyl-tRNA synthetase, class IIc, N-terminal; IPR018165: Alanyl-tRNA synthetase, class IIc, core domain GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0003676 MF: nucleic acid binding; GO:0004813 MF: alanine-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0006419 BP: alanyl-tRNA aminoacylation; GO:0016876 MF: ligase activity, forming aminoacyl-tRNA and related compounds; GO:0043039 BP: tRNA aminoacylation
Type	Genomic
Sequence	TraesCS3A01G024100.1 TraesCS3A01G024100.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring