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GrainGenes Probe Report: TraesCS2D01G535400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G535400
Locus	TraesCS2D01G535400.1
URL	Pfam PF01471 [ Show all 14 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|G7JW40|G7JW40_MEDTR Human Readable Description: Matrix metalloproteinase Pfam IDs Description: PF01471: Putative peptidoglycan binding domain; PF00413: Matrixin InterPro IDs Description: IPR001818: Peptidase M10, metallopeptidase; IPR002477: Peptidoglycan binding-like; IPR006026: Peptidase, metallopeptidase; IPR021158: Peptidase M10A, cysteine switch, zinc binding site; IPR021190: Peptidase M10A; IPR024079: Metallopeptidase, catalytic domain GO IDs Description via InterPro: GO:0004222 MF: metalloendopeptidase activity; GO:0006508 BP: proteolysis; GO:0008237 MF: metallopeptidase activity; GO:0008270 MF: zinc ion binding; GO:0031012 CC: extracellular matrix
Type	Genomic
Sequence	TraesCS2D01G535400.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring