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GrainGenes Probe Report: TraesCS2D01G303500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G303500
Locus	TraesCS2D01G303500.1
URL	Pfam PF00270 [ Show all 28 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|P9WH05|DEAD_MYCTU Human Readable Description: ATP-dependent RNA helicase DeaD Pfam IDs Description: PF00270: DEAD/DEAH box helicase; PF00271: Helicase conserved C-terminal domain; PF16124: RecQ zinc-binding; PF09382: RQC domain; PF00570: HRDC domain InterPro IDs Description: IPR001650: Helicase, C-terminal; IPR002121: HRDC domain; IPR002464: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; IPR004589: DNA helicase, ATP-dependent, RecQ type; IPR010997: HRDC-like; IPR011545: DEAD/DEAH box helicase domain; IPR011991: Winged helix-turn-helix DNA-binding domain; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR018982: RQC domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase; IPR032284: ATP-dependent DNA helicase RecQ, zinc-binding domain GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0003676 MF: nucleic acid binding; GO:0003824 MF: catalytic activity; GO:0005524 MF: ATP binding; GO:0005622 CC: intracellular; GO:0006260 BP: DNA replication; GO:0006281 BP: DNA repair; GO:0006310 BP: DNA recombination; GO:0008026 MF: ATP-dependent helicase activity; GO:0043140 MF: ATP-dependent 3'-5' DNA helicase activity; GO:0044237 BP: cellular metabolic process
Type	Genomic
Sequence	TraesCS2D01G303500.1 TraesCS2D01G303500.2 TraesCS2D01G303500.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring