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GrainGenes Probe Report: TraesCS2D01G241300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G241300
Locus	TraesCS2D01G241300.2
URL	Pfam PF09416 [ Show all 16 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8CG17|M8CG17_AEGTA Human Readable Description: Regulator of nonsense transcripts 1-like protein Pfam IDs Description: PF09416: RNA helicase (UPF2 interacting domain); PF04851: Type III restriction enzyme, res subunit; PF13086: AAA domain; PF13087: AAA domain InterPro IDs Description: IPR006935: Helicase/UvrB, N-terminal; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR018999: RNA helicase UPF1, UPF2-interacting domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0000184 BP: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; GO:0003677 MF: DNA binding; GO:0004386 MF: helicase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0008270 MF: zinc ion binding; GO:0016787 MF: hydrolase activity
Type	Genomic
Sequence	TraesCS2D01G241300.1 TraesCS2D01G241300.2 TraesCS2D01G241300.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring