Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS2D01G169900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G169900
Locus	TraesCS2D01G169900.1
URL	Pfam PF03859 [ Show all 16 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|Q8S389|Q8S389_BRANA Human Readable Description: Calmodulin-binding transcription activator Pfam IDs Description: PF03859: CG-1 domain; PF01833: IPT/TIG domain; PF12796: Ankyrin repeats (3 copies); PF00612: IQ calmodulin-binding motif InterPro IDs Description: IPR000048: IQ motif, EF-hand binding site; IPR002110: Ankyrin repeat; IPR002909: IPT domain; IPR005559: CG-1 DNA-binding domain; IPR013783: Immunoglobulin-like fold; IPR014756: Immunoglobulin E-set; IPR020683: Ankyrin repeat-containing domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0005515 MF: protein binding; GO:0005634 CC: nucleus
Type	Genomic
Sequence	TraesCS2D01G169900.1 TraesCS2D01G169900.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring