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GrainGenes Probe Report: TraesCS2B01G190100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2B01G190100
Locus	TraesCS2B01G190100.1
URL	Pfam PF00270 [ Show all 27 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|B9S9D0|B9S9D0_RICCO Human Readable Description: ATP-dependent RNA helicase, putative Pfam IDs Description: PF00270: DEAD/DEAH box helicase; PF00271: Helicase conserved C-terminal domain; PF04408: Helicase associated domain (HA2); PF07717: Oligonucleotide/oligosaccharide-binding (OB)-fold; PF01485: IBR domain, a half RING-finger domain InterPro IDs Description: IPR000504: RNA recognition motif domain; IPR001650: Helicase, C-terminal; IPR001841: Zinc finger, RING-type; IPR002464: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; IPR002867: IBR domain; IPR004088: K Homology domain, type 1; IPR007502: Helicase-associated domain; IPR011545: DEAD/DEAH box helicase domain; IPR011709: Domain of unknown function DUF1605; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR013087: Zinc finger C2H2-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR017907: Zinc finger, RING-type, conserved site; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0003723 MF: RNA binding; GO:0004386 MF: helicase activity; GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008026 MF: ATP-dependent helicase activity; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS2B01G190100.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring