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GrainGenes Probe Report: TraesCS2B01G030800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2B01G030800
Locus	TraesCS2B01G030800.2
URL	Pfam PF01149 [ Show all 16 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8B504|M8B504_AEGTA Human Readable Description: Formamidopyrimidine-DNA glycosylase Pfam IDs Description: PF01149: Formamidopyrimidine-DNA glycosylase N-terminal domain; PF06831: Formamidopyrimidine-DNA glycosylase H2TH domain InterPro IDs Description: IPR010979: Ribosomal protein S13-like, H2TH; IPR012319: Formamidopyrimidine-DNA glycosylase, catalytic domain; IPR015886: DNA glycosylase/AP lyase, H2TH DNA-binding; IPR020629: Formamidopyrimidine-DNA glycosylase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0003684 MF: damaged DNA binding; GO:0003906 MF: DNA-(apurinic or apyrimidinic site) lyase activity; GO:0006281 BP: DNA repair; GO:0006284 BP: base-excision repair; GO:0006289 BP: nucleotide-excision repair; GO:0008270 MF: zinc ion binding; GO:0008534 MF: oxidized purine nucleobase lesion DNA N-glycosylase activity; GO:0016799 MF: hydrolase activity, hydrolyzing N-glycosyl compounds
Type	Genomic
Sequence	TraesCS2B01G030800.1 TraesCS2B01G030800.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring