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GrainGenes Probe Report: TraesCS2A01G495200

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS2A01G495200
Locus
TraesCS2A01G495200.1
URL
Pfam PF02919
[ Show all 19 ]
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|M8BT37|M8BT37_AEGTA
Human Readable Description: DNA topoisomerase 1
Pfam IDs Description: PF02919: Eukaryotic DNA topoisomerase I, DNA binding fragment; PF01028: Eukaryotic DNA topoisomerase I, catalytic core; PF14370: C-terminal topoisomerase domain
InterPro IDs Description: IPR001631: DNA topoisomerase I; IPR008336: DNA topoisomerase I, DNA binding, eukaryotic-type; IPR011010: DNA breaking-rejoining enzyme, catalytic core; IPR013030: DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-type; IPR013034: DNA topoisomerase I, domain 1; IPR013499: DNA topoisomerase I, eukaryotic-type; IPR013500: DNA topoisomerase I, catalytic core, eukaryotic-type; IPR014711: DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type; IPR014727: DNA topoisomerase I, catalytic core, alpha/beta subdomain; IPR018521: DNA topoisomerase I, active site; IPR025834: Topoisomerase I C-terminal domain
GO IDs Description via Interpro: GO:0003677 MF: DNA binding; GO:0003917 MF: DNA topoisomerase type I activity; GO:0005694 CC: chromosome; GO:0006265 BP: DNA topological change
Type
Genomic
Sequence
TraesCS2A01G495200.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring