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GrainGenes Probe Report: NikM62

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
NikM62  [ Marker Report ]
Locus
NikM62h
[ Show all 11 ]
Reference
ReferenceLeigh F et al. (2003) Comparison of the utility of barley retrotransposon families for genetic analysis by molecular marker techniques Molecular Genetics and Genomics 269:464-474.
General Remarks
Position of retroposon-based primer in the LTR = 5' and 80 nucleotides internal to the LTR terminus
MseI primer (KeyGene code) = CTT (M62)
Type
PCR
STS
PCR primers
Nikita-E2647 5' ACCCCTCTAGGCGACATCC 3'
Mse1 primer M62 5' GATGAGTCCTGAGTAACTT 3'
Amplification Conditions
amplified as Vos et al Nucl Acids Res 23: 4407-4414
Source Species
Hordeum vulgare